BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015H04LP1|AL426916
(658 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1227 0.0
>3x_Contig1770
Length = 29267
Score = 1227 bits (616), Expect = 0.0
Identities = 630/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 3 gttaactctgtwcttgttgtatttctccaactcagcagcgaagatgttcaacaacaactc 62
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15900 gttaactctgtacttgttgtatttctccaactcagcagcgaagatgttcaacaacaactc 15959
Query: 63 ggagtcactmtccgtgttgatatgtctatgtacatcttcatccatgtaacgttgtatagc 122
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15960 ggagtcactatccgtgttgatatgtctatgtacatcttcatccatgtaacgttgtatagc 16019
Query: 123 ctgagtgttaaccaaattaccgttatggcccatacagatcccatatggactgttgacata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16020 ctgagtgttaaccaaattaccgttatggcccatacagatcccatatggactgttgacata 16079
Query: 183 gaaaggktgagcttcagagttagcactggaaccagcagttggataacgcaagtgangcga 242
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 16080 gaaaggttgagcttcagagttagcactggaaccagcagttggataacgcaagtga-gcaa 16138
Query: 243 tacccatggaaccaactaatccggccattctttgttgagtgaaaacgtcacgagccatac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16139 tacccatggaaccaactaatccggccattctttgttgagtgaaaacgtcacgagccatac 16198
Query: 303 cgttacccttgcattggtataatctaccacgttgcccacaagtcgagataccagcagcat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16199 cgttacccttgcattggtataatctaccacgttgcccacaagtcgagataccagcagcat 16258
Query: 363 cttgacctctatgttgtaaaaataaacatccgtcgaataattctggagcaacagcagctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16259 cttgacctctatgttgtaaaaataaacatccgtcgaataattctggagcaacagcagctg 16318
Query: 423 tttgatccgccaaacaaatacctaacacaccacacatttatcttcttttctatgtagaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16319 tttgatccgccaaacaaatacctaacacaccacacatttatcttcttttctatgtagaat 16378
Query: 483 aatgtcccacttgtctatctcagttgcgttctttaaatcaaactgtatatgadagaacga 542
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 16379 aatgtcccacttgtctatctcagttgcgttctttaaatcaaactgtatatgaaagaacga 16438
Query: 543 ctagtaatcaaataatcctagtatgaatccgtattcactcaccactatatttcaaacaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16439 ctagtaatcaaataatcctagtatgaatccgtattcactcaccactatatttcaaacaaa 16498
Query: 603 taatcagtaatcaaagaaaagttcagatctctcttt 638
||||||||||||||||||||||||||||||||||||
Sbjct: 16499 taatcagtaatcaaagaaaagttcagatctctcttt 16534
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4453
Number of Sequences: 1807
Number of extensions: 4453
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 1
length of query: 658
length of database: 10,358,551
effective HSP length: 16
effective length of query: 642
effective length of database: 10,329,639
effective search space: 6631628238
effective search space used: 6631628238
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)